BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB032D08LP1|AL429567
(843 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig329 1027 0.0
3x_Contig942 500 e-141
>3x_Contig329
Length = 2187
Score = 1027 bits (518), Expect = 0.0
Identities = 525/526 (99%), Gaps = 1/526 (0%)
Strand = Plus / Plus
Query: 1 aatcgctgatttggtgtgactttagataagtgaaaaaaaaaaaactgtggaaaacggtgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1663 aatcgctgatttggtgtgactttagataagtgaaaaaaaaaaaactgtggaaaacggtgc 1722
Query: 61 ccttcgaagggtaacttggaagggggggaaatgaaaaaatgcagtttgtgaacacgcatc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1723 ccttcgaagggtaacttggaagggggggaaatgaaaaaatgcagtttgtgaacacgcatc 1782
Query: 121 acatgacctggaggtcatgtgaatttgtaattatgactcttctttgggccgtccggaaat 180
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 1783 acatgacctggaggtcatgtga-tttgtaattatgactcttctttgggccgtccggaaat 1841
Query: 181 aaacaggagcggcgtttgctaatataatccgttaaaaaagtaaattacgaagcgcatttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1842 aaacaggagcggcgtttgctaatataatccgttaaaaaagtaaattacgaagcgcatttt 1901
Query: 241 cttgccctttccgcagcgtaaacacgtaaatcaccgtaactaacgccgcgtacaacctgc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1902 cttgccctttccgcagcgtaaacacgtaaatcaccgtaactaacgccgcgtacaacctgc 1961
Query: 301 atacactacctccactattcggtaagcgggtattagcatttataggtttctagtgggggg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1962 atacactacctccactattcggtaagcgggtattagcatttataggtttctagtgggggg 2021
Query: 361 gtccctatttttggtttaatttcctttcgatatttaccattttcactggaaacctgagga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2022 gtccctatttttggtttaatttcctttcgatatttaccattttcactggaaacctgagga 2081
Query: 421 ttatctcccttcgcattattacaaatatccaaatatccatggattggaatctgtagcgcc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2082 ttatctcccttcgcattattacaaatatccaaatatccatggattggaatctgtagcgcc 2141
Query: 481 gctatttgcaggcaaacccttactaaatccccgttttccattcctt 526
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2142 gctatttgcaggcaaacccttactaaatccccgttttccattcctt 2187
>3x_Contig942
Length = 3614
Score = 500 bits (252), Expect = e-141
Identities = 262/264 (99%), Gaps = 1/264 (0%)
Strand = Plus / Minus
Query: 580 ctgttgaaaaacttatatcctttcttttgtcagcttttctgggattatgtactgcttata 639
||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 3597 ctgttgacaaacttatatc-tttcttttgtcagcttttctgggattatgtactgcttata 3539
Query: 640 ataatagcctttaatgcttgttctttattttatttaaagtttttgatgccaaaatggttt 699
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3538 ataatagcctttaatgcttgttctttattttatttaaagtttttgatgccaaaatggttt 3479
Query: 700 gggtatttttgtatataacggtgaacctttgaggttttggaccctagtttaggtatttat 759
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3478 gggtatttttgtatataacggtgaacctttgaggttttggaccctagtttaggtatttat 3419
Query: 760 atcagataatgtttacgtactgcttggtggtgtcaatgcacatcccctatctgtaattct 819
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3418 atcagataatgtttacgtactgcttggtggtgtcaatgcacatcccctatctgtaattct 3359
Query: 820 gttgttaaacgtttctctcacaac 843
||||||||||||||||||||||||
Sbjct: 3358 gttgttaaacgtttctctcacaac 3335
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 12,665
Number of Sequences: 1807
Number of extensions: 12665
Number of successful extensions: 96
Number of sequences better than 1.0e-20: 2
length of query: 843
length of database: 10,358,551
effective HSP length: 16
effective length of query: 827
effective length of database: 10,329,639
effective search space: 8542611453
effective search space used: 8542611453
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)